Report of content found at http://pdb.ug.virtualflybrain.org on Mon, 14 Oct 2024 10:56:56
Ontology Content
| Anatomy | Classes | Publications |
|---|---|---|
| All Terms | 28236 | 1993 |
| All Nervous System Parts | 21620 | 1589 |
| All Neurons | 17951 | 1338 |
| Characterised Neurons | 6627 | 1336 |
| Provisional Neurons | 11324 | 18 |
| All Nervous System Regions | 1434 | 240 |
| Synaptic Neuropils | 625 | 136 |
| Neuron Projection Bundles | 599 | 125 |
| Cell Body Rinds | 132 | 8 |
| Sense Organs | 861 | 137 |
158038 formal assertions, of which 68837 are SubClassOf assertions and 89201 are other relationship types
144049 formal assertions on nervous system components, of which 60767 are SubClassOf assertions and 83282 are other relationship types
Image Content
(excludes hemibrain v1.0.1)
348239 total images from 111 datasets
270173 single neuron images of 13906 cell types
40950 images of expression patterns of 16297 drivers
2736 images of expression patterns of 579 split combinations
50690 images of expression pattern fragments of 4703 drivers
Annotations
90795 annotations recording 3130 types of anatomical structure that 12213 specific driver lines are expressed in.
82739 annotations recording 2262 parts of the nervous system that 10998 specific driver lines are expressed in.
7553 annotations recording 1396 types of neuron that 2257 specific driver lines are expressed in.
4589 annotations recording 599 types of neuron that 1161 specific split combinations are expressed in.
Connectivity
| Neuron | Number of Neurons | Input/Output Entity | Number of Entities | Connections |
|---|---|---|---|---|
| Any neuron (individuals) | 241576 | Any neuron (individuals) | 241576 | 10508760 |
| Any neuron (individuals) | 22585 | Region (individuals) | 218 | 299683 |
| Any neuron (classes) | 1099 | Muscle (classes) | 231 | 1060 |
| Any neuron (classes) | 773 | Sense organ (classes) | 433 | 534 |
Content by Template
(excludes hemibrain v1.0.1)
| Template Name | Datasets | Images | Single Neurons | EM Neurons | Full Expression Patterns | Split Expression Patterns | Partial Expression Patterns | Painted domains |
|---|---|---|---|---|---|---|---|---|
| Adult Head (McKellar2020) | 1 | 18 | 0 | 0 | 0 | 0 | 0 | 0 |
| L1 larval CNS ssTEM - Cardona/Janelia | 24 | 5019 | 5019 | 5019 | 0 | 0 | 0 | 0 |
| JRC2018UnisexVNC | 22 | 44363 | 25789 | 2029 | 7689 | 0 | 10240 | 23780 |
| adult brain template Ito2014 | 1 | 75 | 1 | 0 | 0 | 0 | 0 | 75 |
| Adult T1 Leg (Kuan2020) | 2 | 678 | 464 | 0 | 0 | 0 | 0 | 4 |
| adult brain template JFRC2 | 21 | 41940 | 16318 | 0 | 24672 | 0 | 16127 | 58 |
| adult VNS template - Court2018 | 9 | 3195 | 1 | 0 | 2691 | 0 | 0 | 22 |
| JRC_FlyEM_Hemibrain | 2 | 22701 | 22588 | 22587 | 0 | 0 | 0 | 114 |
| JRC2018Unisex | 69 | 291978 | 237334 | 167143 | 30023 | 0 | 38796 | 139300 |
| L3 CNS template - Wood2018 | 3 | 2032 | 1412 | 0 | 0 | 0 | 1773 | 255 |