Issues

• issue of onlyAnn mode

  PalMuc/TransPi#58 · Filter by author huawen-poppy opened on Jan 23, 2024

• Can I inform the direction of sequencing?

  PalMuc/TransPi#57 · Filter by author katiacapel opened on Jun 6, 2023
  1

• line 8: insilico_read_normalization.pl: command not found

  PalMuc/TransPi#55 · Filter by author Rahimlou opened on Mar 15, 2023
  5

• TransPi on HPC failing to pull singularity image

  PalMuc/TransPi#53 · Filter by author claumer opened on Oct 4, 2022
  3

• Uniprot Metazoan database not downloaded due to changes in UniProt REST API

  PalMuc/TransPi#52 · Filter by author IdoBar opened on Aug 15, 2022
  2

• Missing transpi_env.yml

  PalMuc/TransPi#51 · Filter by author roscampbell opened on Aug 12, 2022
  2

• Trinotate preparation step in Precheck script silently fails with missing Perl module

  PalMuc/TransPi#50 · Filter by author IdoBar opened on Aug 12, 2022

• Operator into has been deprecated -- it's not available in DSL2 syntax

  PalMuc/TransPi#49 · Filter by author SowmyaPulapet opened on Jul 23, 2022

• problems running full analysis (--all option) and evigene's script

  PalMuc/TransPi#48 · Filter by author BravoScarleth opened on Jul 7, 2022

• Process requirement exceed available memory

  PalMuc/TransPi#47 · Filter by author 1riyu opened on Jun 10, 2022

• Unexpected run time, Trinity/salmon

  PalMuc/TransPi#46 · Filter by author peterdfields opened on Jun 8, 2022
  1

• Signal P Compatibility Error?

  PalMuc/TransPi#44 · Filter by author andypaige772 opened on May 3, 2022
  2

• Transdecoder cannot be found

  PalMuc/TransPi#43 · Filter by author changjjm opened on Apr 27, 2022

• Error Running Full Analysis: Process fastp (1_R1) terminated with an error exit status (255)

  PalMuc/TransPi#41 · Filter by author andypaige772 opened on Mar 19, 2022
  5

• KEGG warn message

  PalMuc/TransPi#40 · Filter by author vruggieri opened on Mar 9, 2022
  3

• Error in rRNAfilter and sortmerna

  PalMuc/TransPi#39 · Filter by author dpaz-corals opened on Mar 4, 2022

• When using singularity, busco step fails when it cannot find database

  testing
  PalMuc/TransPi#36 · Filter by author laninsky opened on Jan 5, 2022
  2

• rnaquast conda error

  PalMuc/TransPi#34 · Filter by author kathrinannaotte opened on Dec 14, 2021
  4

• Error in process busco4_dist

  PalMuc/TransPi#32 · Filter by author ghost opened on Dec 9, 2021
  3

• Error in process Trinotate.

  bug
  PalMuc/TransPi#30 · Filter by author ghost opened on Dec 5, 2021
  4

• Multiple taxid for database download

  enhancement
  PalMuc/TransPi#27 · Filter by author rivera10 opened on Oct 25, 2021

• github update 4 days ago of TransPi.nf

  PalMuc/TransPi#26 · Filter by author dbajpp0 opened on Oct 19, 2021
  1

• error at TransPi_Report_Ind.Rmd

  PalMuc/TransPi#25 · Filter by author dbajpp0 opened on Oct 19, 2021
  1

• Running onlyEvi

  PalMuc/TransPi#23 · Filter by author andypaige772 opened on Aug 22, 2021
  1

• Problem with --onlyAnn ?

  PalMuc/TransPi#19 · Filter by author pmoulos opened on Jun 28, 2021
  3