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@nfdi4plants

DataPLANT

Services and infrastructures to support #FAIRData science and good data management practices within the plant basic research community. #NFDI.

Hi there 👋 We are DataPLANT

Our mission: Driving the digital change in plant science

DataPLANT’s mission is to provide a sustainable and well annotated data management platform for plant sciences. DataPLANT will pave the way from classical paper publication to pure data publication including the Annotated Research Context (ARC)

The community

DataPlant is primarily geared towards the needs of fundamental plant research (e.g. those represented by the DFG categories 202-[01 evolution and systematics of plants and animals, 04 plant physiology, 05 plant biochemistry and biophysics, 06 plant cell and developmental biology, 07 plant genetics]. As such DataPlant is especially adapter to large scale data sets be it omics science or imaging and is ready to store petabaytes of annotated data.

The Annotated Research Context (ARC)

DataPlant will allow users to store their data in form of an annotated research context. This includes not only the measurement data, but also (meta)data annotations, tools, and scripts. This will allow reproducibility plus to forward “raw data” and metadata slices to public repositories (e.g. EBI NCBI etc.).

More info at https://www.nfdi4plants.org/

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  1. Swate Swate Public

    Tool for creating and editing annotation tables in ARCs.

    F# 46 11

  2. DataHUB DataHUB Public

    This repository may be used to collect issues, bugs or similar regarding the DataPLANT DataHUB.

    Shell 6 6

  3. ARCtrl ARCtrl Public

    Polyglot (.NET/JS/Python) library for management of Annotated Research Contexts (ARCs) using an in-memory representation and runtime-agnostic contract systems.

    F# 21 12

  4. ARC-specification ARC-specification Public

    Annotated Research Context - The specification of a general-purpose FAIR digital object

    21 12

  5. arc-validation-package-registry arc-validation-package-registry Public

    A repository of validation packages for ARCs

    F# 4 8

  6. dataplan dataplan Public template

    DataPLAN is a Data Management Plan (DMP) generator developed by DataPLANT

    JavaScript 11 14

Repositories

Showing 10 of 95 repositories
  • Swate Public

    Tool for creating and editing annotation tables in ARCs.

    nfdi4plants/Swate's past year of commit activity
    F# 46 MIT 11 93 9 Updated Sep 24, 2026
  • nfdi4plants/arc-ro-crate-profile's past year of commit activity
    F# 3 MIT 0 16 0 Updated Sep 23, 2026
  • ARCWebView Public
    nfdi4plants/ARCWebView's past year of commit activity
    TypeScript 4 MIT 6 3 2 Updated Sep 22, 2026
  • arc-validate Public

    Libraries and CLI tools for creation, consumption, and execution of ARC validation packages

    nfdi4plants/arc-validate's past year of commit activity
    F# 4 MIT 3 23 11 Updated Sep 22, 2026
  • elab2arc Public

    A tool to convert electronic lab notebook experiments to Annotated Research Context (ARC) assays

    nfdi4plants/elab2arc's past year of commit activity
    JavaScript 4 GPL-3.0 2 6 0 Updated Sep 21, 2026
  • ARC-specification Public

    Annotated Research Context - The specification of a general-purpose FAIR digital object

    nfdi4plants/ARC-specification's past year of commit activity
    21 12 39 1 Updated Sep 21, 2026
  • arcfs-fsspec Public
    nfdi4plants/arcfs-fsspec's past year of commit activity
    Python 0 MIT 1 0 0 Updated Sep 21, 2026
  • DataHUB Public

    This repository may be used to collect issues, bugs or similar regarding the DataPLANT DataHUB.

    nfdi4plants/DataHUB's past year of commit activity
    Shell 6 MIT 6 26 0 Updated Sep 18, 2026
  • nfdi4plants.github.io Public

    DataPLANT website made with Astro 🚀

    nfdi4plants/nfdi4plants.github.io's past year of commit activity
    Astro 5 MIT 23 4 0 Updated Sep 17, 2026
  • nfdi4plants.knowledgebase Public

    Source repo for the nfdi4plants knowledge base webpage.

    nfdi4plants/nfdi4plants.knowledgebase's past year of commit activity
    MDX 6 CC-BY-4.0 40 14 3 Updated Sep 16, 2026