Issues

• add a non. pombe models log

  pombase/pombase-chado#1380 · Filter by author ValWood opened on Oct 12, 2026
  2

  

• Remaining tasks for implementing allele systematic IDs

  genotypehigh priorityinternal
  pombase/pombase-chado#1377 · Filter by author kimrutherford opened on Sep 22, 2026
  17

  

• changes to expression ontology and annotation

  discuss
  pombase/pombase-chado#1372 · Filter by author ValWood opened on Aug 26, 2026
  11

  

• Remove redundant interactions in the nightly load

  high prioritynext
  pombase/pombase-chado#1370 · Filter by author kimrutherford opened on Aug 13, 2026
  

• "confirmed intron" annotation on introns not loaded

  discussfuture
  pombase/pombase-chado#1338 · Filter by author kimrutherford opened on Mar 9, 2026
  10

  

• new datasets in the release (announcement)

  announce
  pombase/pombase-chado#1332 · Filter by author ValWood opened on Feb 17, 2026
  

• Load the parental strain and strain background from PHAF

  discusshigh priority
  pombase/pombase-chado#1306 · Filter by author kimrutherford opened on Oct 10, 2025
  2

  

• List of PMID/title Sessions through canto classed as 'curatable' with no annotation

  AI-datasets
  pombase/pombase-chado#1304 · Filter by author ValWood opened on Oct 9, 2025
  2

  

• Tidy the annotation comments before storing in Chado

  AI-datasets
  pombase/pombase-chado#1300 · Filter by author kimrutherford opened on Sep 29, 2025
  2

  

• Automated condition check decreased cell population growth at high temperature (FYPO:0000082)

  pombase/pombase-chado#1294 · Filter by author ValWood opened on Aug 26, 2025
  1

  

• Bug - annotation on incorrect features

  discussdocumentation
  pombase/pombase-chado#1275 · Filter by author kimrutherford opened on May 14, 2025
  19

  

• deletion allele names

  discussmedium priority
  pombase/pombase-chado#1261 · Filter by author ValWood opened on Feb 25, 2025
  2

  

• Fix GAF loading for RNAcentral annotations

  external datawaiting
  pombase/pombase-chado#1255 · Filter by author kimrutherford opened on Jan 24, 2025
  15

  

• Support RNAcentral IDs when loading complex portal data

  buglow prioritywaiting
  pombase/pombase-chado#1243 · Filter by author kimrutherford opened on Dec 10, 2024
  2

  

• Export all publications with exp data for RNA genes

  AI-datasetslow priority
  pombase/pombase-chado#1211 · Filter by author ValWood opened on Aug 29, 2024
  4

  

• Training datasets for ML/AI - publication centric

  AI-datasetsdiscusslow priorityneeded_for_grantwaiting
  pombase/pombase-chado#1181 · Filter by author ValWood opened on Jun 18, 2024
  7

  

• block false positive publications in gene page publication list

  discusslow priority
  pombase/pombase-chado#1162 · Filter by author ValWood opened on Apr 11, 2024
  4

• Create "Synthetic phenotype" genetic interactions automatically

  future
  pombase/pombase-chado#1116 · Filter by author kimrutherford opened on Sep 30, 2023
  

• Make a file with all allele details for QC pipeline

  pombase/pombase-chado#1103 · Filter by author kimrutherford opened on Aug 10, 2023
  9

  

• Keep a changelog of fixed alleles

  discuss
  pombase/pombase-chado#1058 · Filter by author manulera opened on Jan 30, 2023
  3

  

• Change the quick search to find obsolete genes on the merges and deletions page

  discussmedium priorityQCstandardization
  pombase/pombase-chado#1054 · Filter by author kimrutherford opened on Jan 12, 2023
  7

  

• Auto conversion of old style genetic interactions (GIs) to new style

  enhancementmedium priority
  pombase/pombase-chado#1036 · Filter by author ValWood opened on Nov 2, 2022
  1

• Send data to APICURON (placeholder issue)

  apicuronexport fileshigh priority
  pombase/pombase-chado#1013 · Filter by author kimrutherford opened on Aug 15, 2022
  14

  

• filter external physical interactions that do not have a fission yeast Uniprot:acc in the "with" field (i.e interaction with another organism protein)

  low priority
  pombase/pombase-chado#1001 · Filter by author ValWood opened on Jul 21, 2022
  3

  

• background allele filtering (part of 'clean-up' exercise)

  logsmedium priorityquick
  pombase/pombase-chado#979 · Filter by author ValWood opened on May 31, 2022
  3