convert 23andme or Ancestry.com raw genotype calls into VCF format, with dbSNP annotations
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Sep 16, 2019 - Go
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dbsnp
Here are 15 public repositories matching this topic...
Methods for mapping genomic data onto 3D protein structure.
binder genomics protein-data-bank protein-structure pyspark mutations dbsnp protein-protein-interaction protein-ligand-interactions cyverse protein-drug-interactions mmtf-pyspark
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May 17, 2022 - Jupyter Notebook
An Open Source Web Application for Genetic Data (SNPs) Data Crawling
snps genome genetic-algorithm dbsnp phenotype snpedia clinvar omni 23andme genetic-data ancestrydna data-crawling rsid genetic-tests os-genome
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Apr 24, 2026 - JavaScript
Warehousing DbSNP's JSON Data into PostgreSQL
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Jun 26, 2018 - Python
Identification of cancer-causing variants
bioinformatics annotations clinical dbsnp variants cancer-genomics clinvar diseases cancer-research grch37 cancer-detection allele-frequencies conservation-scores functional-prediction pathogenic-variants dbnsfp gnomad clinical-significance hereditary-cancer-syndrome acmg-guidelines
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Apr 19, 2024 - Python
biopython + VCF support, based on pyVCF
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Jul 6, 2017 - Python
Scripts that collect dbSNP, ClinVar and OMIM variants of the human insulin signaling and tryptophan metabolism pathway genes (2018)
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Oct 21, 2026 - Python
ETL scripts to populate caBIO database
python java database perl dbsnp shell-scripts pathways transcriptomics uniprotkb unigene etl-pipeline
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Oct 19, 2021
Local-first 23andMe and DTC DNA raw data to VCF 4.2 converter with PySide6 GUI, GRCh37/GRCh38 detection, and dbSNP/FASTA REF lookup
python bioinformatics genetics vcf dna dbsnp 23andme personal-genomics grch37 genetic-data grch38 vcf-converter privacy-first local-first pyside6 bioinformatics-tools dtc-genetics genotype-converter raw-dna dtc-dna
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Oct 25, 2026 - Python
Curated, cited per-variant genomics notes (genetics + diet/lifestyle/region evidence) built from open APIs. DNA is the source of truth; region/diet are context.
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Jul 25, 2026 - JavaScript
Non-biallelic SNPs for population genetics and forensics.
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Mar 18, 2018 - C
This folder contains R scripts for differential expression analysis and analyses of tissue-specific expression, inter-species conservation, and genetic variations of the CAPN10 gene in a bioinformatics project on PCOS and insulin resistance.
dbsnp gtex clinvar differential-expression ncbi-geo limma ucsc-browser expression-atlas dbvar microarray-data-analysis human-protein-atlas pcos-database
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Jul 16, 2026 - R
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