genomics-tools

Here are 2 public repositories matching this topic...

raonyguimaraes / bioinformatics-mcp

🧬 A comprehensive MCP server for bioinformatics — 62 tools for genomics, transcriptomics, epigenetics & more. Connects AI agents to scanpy, biopython, squidpy, NCBI, UniProt, Ensembl, and PubMed.

python bioinformatics rna-seq genomics mcp methylation biopython single-cell ai-agents claude spatial-transcriptomics scanpy llm-tools model-context-protocol genomics-tools

Updated Jul 27, 2026
Python

jcaperella29 / ATAC_APP

Star

Interactive ATAC-seq peak analysis app in R Shiny—annotation, motif enrichment, machine learning, and more. Singularity/HPC ready.

bioinformatics r shiny hpc slurm singularity atac-seq singularity-container functional-enrichment chipseeker genomics-tools

Updated Jan 14, 2026
R

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