mass-spectra

Here are 8 public repositories matching this topic...

sirius-ms / sirius

SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository contains the code of the SIRIUS Software (GUI and CLI)

java science bioinformatics cheminformatics molecular-structures sirius metabolomics mass-spectrometry ms-data denovo molecular-formulas ms-spectra structure-elucidation fragmentation-trees csi-fingerid fingerid isotope-pattern mass-spectra

Updated Aug 25, 2026
Java

muCommons / NistChemPy

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Unofficial Python tools for querying NIST Chemistry WebBook pages and extracting molecular-property records.

python chemistry cheminformatics data-extraction physical-chemistry spectral-data chemical-data gas-chromatography mass-spectra infrared-spectra molecular-properties scientific-python nist-chemistry-webbook

Updated May 20, 2026
Python

johon-lituobang / MM

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Infer metabolic directions from moment differences of mass-weighted intensity distributions

annotations moment metabolomics mass-spectrometry moments metabolic-models metabolic-network metabolic-engineering mass-spectrum metabolic-pathways metabolic-flux-analysis mass-spectra mass-spectrometry-data metabolic-networks

Updated Feb 9, 2024
R

gerasimoska / mass_spectra

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Mass spectral libraries search tool (MSL-ST), used to enhance organic compounds' identification

bioinformatics cheminformatics mass-spectrometry organic-chemistry analytical-chemistry mass-spectra mass-spectral-libraries

Updated Aug 14, 2021
Python

tacular-omics / mzmlpy

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Fast, lazy mzML reader for Python: typed models, gzip random access, validation, Numpress/zstd decoding

python bioinformatics compression proteomics mass-spectrometry mzml ion-mobility mass-spectra timstof

Updated Sep 25, 2026
Python

tacular-omics / spxtacular

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Chainable Spectrum API for MS processing: denoising, isotope deconvolution, matching, scoring, plotting

python proteomics metabolomics mass-spectrometry omics lipidomics bruker mzml deconvolution mass-spectra spectrum-processing

Updated Sep 25, 2026
Python

hcji / deblank

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This is a GUI for removing baseline ions from samples based on the blank sampe

chromatography mass-spectra

Updated May 27, 2018
R

Adafede / CentroidR

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https://adafede.github.io/CentroidR

r mass-spectrometry centroid mass-spectra centroiding

Updated Sep 25, 2026
R

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