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1. SplitAligner SplitAligner Public

   split-based gene tree–species tree reconciliation for robust branch mapping under missing taxa

   Perl 3

2. SplitAlignerR SplitAlignerR Public

   SplitAlignerR is the R reference implementation track for the SplitAligner branch-coordinate framework.

   R

3. SGV-caller SGV-caller Public

   SGV-caller: SARS-CoV-2 genome variation caller

   Perl 1 1

4. RRAA RRAA Public

   Perl

5. Catnip10 Catnip10 Public

   Deterministic conformance benchmark for branch-coordinate validity under taxon pruning and equivalent tree representations

   Python 1

6. marine_mammal marine_mammal Public

   Softwares and data for marine mammal genome analysis

   R